sme_contrib.optimize

Optimization, fitting and analysis

Functions

abs_diff(x, y)

Absolute difference between two arrays

hessian(f, x0[, rel_eps, processes])

Approximate Hessian of function f at point x0

minimize(f, lowerbounds, upperbounds[, …])

Minimize function f using particle swarm

rescale(x, new_max_element)

Rescale an array

Classes

SteadyState(modelfile, imagefile, species, …)

Steady state parameter fitting